Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015936494.1_cds_XP_016482055.1_73321
CDS Infomation	[gene=LOC107802983] [db_xref=GeneID:107802983] [protein=E3 ubiquitin-protein ligase SHPRH] [protein_id=XP_016482055.1] [location=complement(join(1599..1754,2221..2426,4644..4873,5046..5198,6336..6502,7789..8361,8448..8617,8690..8930,9073..9328,17521..17721,19999..20488,21082..21143,21688..21894,21982..22784))] [gbkey=CDS]
Sequence	ATGGGTCGAAGGAAATCTAAGCCAAATCGTTCGGTAGGAATTTTGGAAGGAGAAGTTCCT AATGGGCAATTAAACGGAAAAACGGATGCTGAAACTGCAAAAAAAGATGAGTCTTTTGAA GTCGACGTGCCATTTTTTGTTGAAATTGATAGGTCTAATTGGTTATCTGATGAACATATG GATATTTCTGAAATTGTTTTATCTGACTTGAATGTTAGTGAAGAGTTTGGTCATTATGTA TTAGATGAGGAGTTTTGCCGGGATTCGAGGTATATGTTGAGGTTTAGGGTGAGTAATGTT AATGAGTATCTTAGTAGGATAAAGTTAGGTCATTGGCCTGTATTATCTGCTAGTAGTATA TGTTTGGAAATTGTAGTGAAAAAGGAGGAGGAGGGTTTGGAGGAAAATGTTGTGTTGGTG GAGGGAAATTTCGATGGACCTGATGAAGGTATATCAGGGCTAGTCCATTTGGCTAGTTTG AAATTCTTGACGTTGAGGCTTGTTACGGGGCATATTGTTCCAAGTTGTTTAGCATCTATA CGGTTGAGGGTGGAGATTTTAAAAAGTGCATTTGACGCGTGTGAGTCACTTCTTGATACA TCCAGACAGCTATGGAAAAAGAGCATGATGCATGTGATGGCTTGGCTACGTCCAGAGGTT GTGACTTCAGAGGCTAGATATGGATACGAGGTGGCAGCGCATTCGGATGTTGGTCTAGCT TCAGGGCTGGCTGAAAGTTCTGCTTCAAGGAAATGTTCTAGGTTTGATGTAGCTAGTTTC TATGAAGCTATTAAGCCATCAAAGGAGGAGCCAATGCTGGATGATAACCTCCCTGGTTTG CTTCCTAAGCTTAGACCTTACCAGCGTCGTGCAGCTTATTGGATGGTGCGGAGGGAGAAA AGAAATTTTGATGGCTCTTTGCAAAGCAAAACAAATCACTTTATTTCTCCTATATGTATG CGACTGAGTTTAATTGACACCTCTATGACAATATATTACAATCCATTTTGTGGAAATGTA TCCTTGCATCCAGAGATCCCCCCACCAGTTGTTCCTGGTGGTATTTTAGCTGATGAGATG GGGCTGGGAAAAACTGTTGAGCTGCTTGCTTGTATCTTTGGACATCAGGTGCCATCATCT TGTGTTGGCAATTTTACTGGTGAATTGCTGTGTGATGAGGGTCAGAAAAATAGTCTGAAA AGACTGAAAAGAGAGCGTGTTGAGTGTATATGTGGTTCTGTGAGTGAAAGCATCAGATAT AAAGGATTGTGGGTTCAGTGTGATGTTTGTGATGCGTGGCTACATGCAGATTGTGTCGGC TACTCTCCTAAAAAGAAATATGCAAAATGCGAAGCAATCTTAAATGGACAGCAGTCAACT GTCAATATGTGCAAGCGAGCTAAACGCAAAAACAATGTTAAAATAGTTGAGATGGAAGGC GGCTATATCTGCGAACAGTGCTCAGAACTGATCCAAGCTACTGTAGCGCCGGTTGCCACA GGTGCAACTCTTATAGTGTGTCCAGCTCCTATATTGCCCCAGTGGCATGCTGAAATTGTT CGTCATACAAATCCTGGTGCGCTGAAAACATGCATTTATGAAGGCGTGGGGACTAGCTCT TTATCACAGACGCCCTTGCCAGATATAAATGAGCTTCTTAGTGCCGACATCGTTTTGACA ACTTATGACGTACTGAAAGAGGACTTATCACACGACTCTGACAGGCATGAAGGTGATCGT CGAGCTATGAGATTTGAGAAAAGATATCCTGTTATACCTACTCTACTAACCAGAATATTA TGGTGGAGGATATGTCTGGATGAAGCTCAAATGGTGGAGACTAATGCTGCTGCTGCAACT GAAATGGCACTAAGACTACATGGAGTTCATCGGTGGTGCATTACAGGGACTCCCATACAA AGGAAACTTGATGACTTGTTTGGTCTTTTGAGATTCCTCAATGCAAGTCCTTTTAATATT TTTAGGTGGTGGACCGATATTATACGTGATCCTTATGAGAAGGGAGATTCCAGAGCGATG GCTTTCACACATGATTTCTTTAAGCACCTAATGTGGAGGTCATCAAAGATGAATGTTGCT GATGAACTGCAGCTTCCGCCTCAAGAAGAGTGTGTCTCTTGGCTTTCTCTTTCACCAATT GAAGAGCACTTTTATCAAAGGCAGCATGAGACTTGTGTGAATGACGCTCGTGAGCTTATT GAAAGTTTCAAAAATGATATATACAAGAGAAAAGCACCTGGTTTCCAGTTGGAGGACGCT GCATCAGATGTTGTTATCACAAATATAGAGGCTGCCAAGCTCTTTAACTCACTTCTAAAA CTACGCCAAGCCTGTTGCCACCCCCAGGTGGGGAGTTCTGGGTTGCGATCACTACAACAG TCTCCCATGACTATGGAGGAGATTCTGTCGGTTCTGGTGACTAAGACTAAGGTAGAAGGA GAGGAAGCCCTCCGGAGATTAGTTGTTGCATTAAATGCACTGGCCGGTATTGCTATAATT AATCAAAATTATTCTCAAGCCGTATCATTGTACCAAGAAGCACTCGCTTTAGCAGAAGAC CATTCCGAGGATTTCCGGTTGGATCCCTTGTTAAACATTCATATTACTCATAATCTTGCT GAGATACTCCCACTCACTTCTGACAGTTCGAAAAAGCTTGAATCTGCACCTGGAAGCCCT AGAGATAAAGTATCCAACATGGAAGATGCTGGACAAAGTGATAAAGGTGCTCTACACGGG GAAGACAAAATTAAGGAAGAAAGCATTTTAGTCGCTAGCTCTTGCGATCCATCCAACTTA ATGTCAAATTCACTGGCAAAAGATTATGTTGACGAAAAATCTGAGACTAAGTTAAAGTTG TCCACATGTACAAGTTATGAATCATTGAGAACAGCATGTGAAAATTTGAAGAAAAAATTC TTATCCGTGTTTAGTTTGAAGCTGGCAGGGGCCCAACAAGAGTTCAAAAAGTCATATGAT CAGGTATGTAACGCATTTAGTGATAGAAAGAACCAGTATTCTGCTTGGTGGTTGGAAGTT TTACATCATATTGAGCAAAACAAGGACTCCTCAAATGAATTGATCAGGAAAATAGGAGAA GCTGTGTCTGGGACGCTAAACACCTCTAGGGCATCAAAAGTTGCTTCCTGTTTCCGCAGC ATAACTGCTTTGAAGATTTATATTCAGAGTGGCTTAGATTCATTGGAAAGTTCAAGGGAA TCTTTACTTGTTAAGCTTTTTGAAATTGACAAGACAATGGGCAATCCTAGGAAGGGNGCG GATACAGGCATTTTCCATCTTTATCCTGTGGATGTTAATCTTTCACAGGGTTTGGTTCAA TCTAAACAAAATAATCATTGTGCAAGTAGTGAAAATTCAACTATAGCTCAAGCCACAATG GACTCACCGGCCCATGCAGAAGAAAAAACGGAATACCAAGCTAGAACAGAGGAACATACA TGCCCTGTTTGTCAAGAGAAGCTCAATAACCAAAAGATGGTTTTCCAATGTGGGCATGTC ATTTGTTGTAAATGTCTGTTTGCAATGACAGAGAAAAGATTAGCCCTCCATGGGAAGCCT CAAGTTAACTGGTTAATGTGCCCAACTTGTAGACAGCATACTGACTGCAGGAATATTGCT TATGCTGATGACAGTCAGAATAAGTCTTATCCATCTTCTTCTATTGTCTCTGAAAATTCT GAAGCATCTGTAAATGTCCGAGGTTCATATAGCACAAAGATTGAAGCTGTCACCAGGAGA ATTTTATGGATCACTTCCTCGAACCTAGCAGCAAAGGTTCTAGTCTTTAGCAGTTGGAAT GACGTGCTTGATGTGTTAGAGCATGCGTTTGCAGCTAACAACATAACTTTTGTGCGGATG AAAGGAGGAAGGTAA

Peptide Sequence

PEP ID	XP_016482055.1
PEP Infomation	PREDICTED: E3 ubiquitin-protein ligase SHPRH [Nicotiana tabacum]
Sequence	MGRRKSKPNRSVGILEGEVPNGQLNGKTDAETAKKDESFEVDVPFFVEIDRSNWLSDEHM DISEIVLSDLNVSEEFGHYVLDEEFCRDSRYMLRFRVSNVNEYLSRIKLGHWPVLSASSI CLEIVVKKEEEGLEENVVLVEGNFDGPDEGISGLVHLASLKFLTLRLVTGHIVPSCLASI RLRVEILKSAFDACESLLDTSRQLWKKSMMHVMAWLRPEVVTSEARYGYEVAAHSDVGLA SGLAESSASRKCSRFDVASFYEAIKPSKEEPMLDDNLPGLLPKLRPYQRRAAYWMVRREK RNFDGSLQSKTNHFISPICMRLSLIDTSMTIYYNPFCGNVSLHPEIPPPVVPGGILADEM GLGKTVELLACIFGHQVPSSCVGNFTGELLCDEGQKNSLKRLKRERVECICGSVSESIRY KGLWVQCDVCDAWLHADCVGYSPKKKYAKCEAILNGQQSTVNMCKRAKRKNNVKIVEMEG GYICEQCSELIQATVAPVATGATLIVCPAPILPQWHAEIVRHTNPGALKTCIYEGVGTSS LSQTPLPDINELLSADIVLTTYDVLKEDLSHDSDRHEGDRRAMRFEKRYPVIPTLLTRIL WWRICLDEAQMVETNAAAATEMALRLHGVHRWCITGTPIQRKLDDLFGLLRFLNASPFNI FRWWTDIIRDPYEKGDSRAMAFTHDFFKHLMWRSSKMNVADELQLPPQEECVSWLSLSPI EEHFYQRQHETCVNDARELIESFKNDIYKRKAPGFQLEDAASDVVITNIEAAKLFNSLLK LRQACCHPQVGSSGLRSLQQSPMTMEEILSVLVTKTKVEGEEALRRLVVALNALAGIAII NQNYSQAVSLYQEALALAEDHSEDFRLDPLLNIHITHNLAEILPLTSDSSKKLESAPGSP RDKVSNMEDAGQSDKGALHGEDKIKEESILVASSCDPSNLMSNSLAKDYVDEKSETKLKL STCTSYESLRTACENLKKKFLSVFSLKLAGAQQEFKKSYDQVCNAFSDRKNQYSAWWLEV LHHIEQNKDSSNELIRKIGEAVSGTLNTSRASKVASCFRSITALKIYIQSGLDSLESSRE SLLVKLFEIDKTMGNPRKGADTGIFHLYPVDVNLSQGLVQSKQNNHCASSENSTIAQATM DSPAHAEEKTEYQARTEEHTCPVCQEKLNNQKMVFQCGHVICCKCLFAMTEKRLALHGKP QVNWLMCPTCRQHTDCRNIAYADDSQNKSYPSSSIVSENSEASVNVRGSYSTKIEAVTRR ILWITSSNLAAKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGR

Transcript Sequence

Gene sequence data has not been registered.